Cell Cycle and Genome Instability

(#, co-first authors; *, corresponding authors.)

 

Decoding the interplay between m6A modification and stress granule stability by live cell imaging.

​Li Q, Liu J, Guo L, Zhang Y,  Chen Y, Liu H, Cheng H, Deng L, Qiu J, Zhang K, Wang Y, Goh W, and Peng Q*

​Science Advances, 2024, doi: 10.1126/sciadv.adp5689.

PMID: 39546601

 

​Sec23IP recruits VPS13B/COH1 to ER exit site-Golgi1 interface for tubular ERGIC formation.

Du Y#, Fan X#, Song C, Chang W, Xiong J, Deng L, and Ji W*

Journal of Cell Biology, 2024, 223(12): e202402083. doi: 10.1083/jcb.202402083.

PMID: 39352497

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Unraveling the influence of CRISPR/Cas13a reaction components on enhancing trans-cleavage activity for ultrasensitive on-chip RNA detection.

He Q, Chen Q, Lian L, Qu J, Yuan X, Wang C, Xu L, Wei J, Zeng S, Yu D, Dong Y, Zhang Y, Deng L, Du K, Zhang C, Pandey V, Gul I*, and Qin P*

Mikrochim Acta, 2024, 191(8):466. doi: 10.1007/s00604-024-06545-4.

PMID:39017814

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A complex containing RhoBTB3-SHIP164-Vps26B promotes the biogenesis of early endosome buds at Golgi-endosome contacts.

Wang J#, Xiong J#, Zhang S, Li D, Chu Q, Chang W, Deng L*, and Ji W*

Cell Discovery, 2024, 10, 38. https://doi.org/10.1038/s41421-024-00651-6.

PMID: 38565878

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A distinct class of pan-cancer susceptibility genes revealed by alternative polyadenylation transcriptome-wide association study.

Chen H#, Wang Z#, Gong L, Wang Q, Chen W, Wang J, Ma X, Ding R, Li X, Zou X, Plass M, Lian C, Ni T, Wei G, Li W*, Deng L*, and Li L*

Nature Communications, 2024, 15, 1729. https://doi.org/10.1038/s41467-024-46064-7.

PMID: 38409266

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DONSON: the essential initiator of DNA replication in metazoan.

Rao S, Song C, Chen C, and Deng L*

The Innovation Life, 2023, 1(3), 100039.  https://doi.org/10.59717/j.xinn-life.2023.100039​

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A possible role of VPS13B in the formation of Golgi-lipid droplet contacts associating with the ER.

Du Y, Hu X, Chang W, Deng L, Ji W*, and Xiong J*

Contact, 2023, DOI:10.1177/25152564231195718

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Tex2 is required for lysosomal functions at TMEM55-dependent ER membrane contact sites.

Du Y, Chang W, Gao L, Deng L, and Ji W*

Journal of Cell Biology, 2023, DOI: 10.1083/jcb.202205133.

PMID: 36705603

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Oligomeric CHMP7 mediates three-way ER junctions and ER-mitochondria interactions.

Chu Q#, Wang J#, Du Y, Zhou T, Shi A, Xiong J*, Ji W*, and Deng L* 

Cell Death & Differentiation, 2023, 30(1):94-110.

PMID: 35962186

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A decoy microrobot that removes SARS-CoV-2 and its variants in wastewater.

Lai J, Meng Q, Tian M, Zhuang X, Pan P, Du L, Deng L, Tang J, Jin N, and Rao L*

Cell Reports Physical Science, 2022, DOI: 10.1016/j.xcrp.2022.101061

PMID: 36158867

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FAM135B: a new player in DNA damage response.

Song C, and Deng L* 

Genome Instability & Disease, 2022, doi: 10.1007/s42764-022-00079-w.

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Editorial: DNA replication stress and cell fate.

Deng L*, Chen C, Zhai Y, Dong Y, and Lou H*

Frontiers in Cell and Developmental Biology, 2021, 9:778486. doi: 10.3389/fcell.2021.778486

PMID: 34760895

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Nuclear envelope integrity, DNA replication, damage repair and genome stability.

Pu W, Zhang H, Qin P, and Deng L*

Genome Instability & Disease, 2021, 1, https://link.springer.com/article/10.1007/s42764-021-00039-w

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Msuite: A High-Performance and Versatile DNA Methylation Data-Analysis Toolkit.

Sun K, Li L, Ma L, Zhao Y, Deng L, Wang H, and Sun H*

Patterns, 2020, 1:100127, DOI:https://doi.org/10.1016/j.patter.2020.100127.

PMID: 33294868

 

Epsin-mediated degradation of IP3R1 fuels atherosclerosis.

Dong Y, Lee Y, Cui K, He M, Wang B, Bhattacharjee S, Zhu B, Yago T, Zhang K, Deng L, Ouyang K, Wen A, Cowan D, Song K, Yu L, Brophy M, Liu X, Wylie-Sears J, Wu H, Wong S, Cui G, Kawashima Y, Matsumoto H, Kodera Y, Wojcikiewicz R, Srivastava S, Bischoff J, Wang D, Ley K, and Chen H.*

Nature Communications, 2020, 11(1):3984. doi: 10.1038/s41467-020-17848-4.

PMID: 32770009

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Mitotic CDK promotes replisome disassembly, fork collapse, and complex DNA rearrangements.

Deng L, Wu RA, Sonneville R, Kochenova OV, Labib K, Pellman D*, and Walter JC*

Molecular Cell, 2019, 73(5):915-929.e6.

PMID: 30849395

**Recommended by F1000 in Cell Biology

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TRAIP is a master regulator of cross-link repair and replisome stability.

Wu RA, Semlow DR, Kamimae-Lanning AN, Kochenova OV, Chistol G, Hodskinson MR, Amunugama R, Sparks JL, Wang M, Deng L, Mimoso CA, Patel KJ, and Walter JC* ​

Nature, 2019, doi: 10.1038/s41586-019-1002-0.

PMID: 30842657

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Phosphatases generate signal specificity downstream of Ssp1 kinase in fission yeast.

Deng L, Lee ME, Schutt KL, and Moseley JB*

Molecular and Cellular Biology, 2017, 37:e00494-16.doi: 10.1128/MCB.00494-16.

PMID: 28223368

**Featured article in MCB, May 2017.

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Metabolic Syndrome, Inflammation, and Cancer.

Wu Y*, Dong Y, Duan S, Zhu D, and Deng L

Mediators of Inflammation, 2017, doi.org/10.1155/2017/8259356.

PMID: 29302133

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CAG expansions are genetically stable and form nontoxic aggregates in cells lacking endogenous polyglutamine proteins.

Zurawel AA, Kabeche R, DiGregorio SE, Deng L, Menon KM, Opalko H, Duennwald ML, Moseley JB, and Supattapone S*

mBio, 2016, 7, doi: 10.1128/mBio.01367-16.

PMID: 27677791

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Insights from genetic model systems of retinal degeneration: role of Epsins in retinal angiogenesis and VEGFR2 signaling.

Dong Y, Cai X, Wu Y, Liu, Y, Deng L, and Chen H*

Journal of Nature and Science, 2016, 3, (1):e281.

PMID: 28191500

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Role of endoplasmic reticulum stress signaling in diabetic endothelial dysfunction and atherosclerosis.

Dong Y, Fernandes C, Liu Y, Wu Y, Wu H, Brophy ML, Deng L, Song K, Wen A, Wong S, Yan D, Towner R, and Chen H*

Diabetes & Vascular Disease Research, 2016, doi: 10.1177/1479164116666762.

PMID: 27941052

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TaADF3, actin-depolymerizing factor, negatively modulates wheat resistance against Puccinia striiformis.

Tang C#, Deng L#, Chang D, Chen S, Wang X, and Kang Z*

Frontiers in Plant Science, 2016, 6:1214 doi: 10.3389/fpls.2015.01214.

PMID: 26834758

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TaSYP71, a Qc-SNARE, Contributes to Wheat Resistance against Puccinia striiformis f. sp. tritici.

Liu M, Peng Y, Li H, Deng L, Wang X, and Kang Z*

Frontiers in Plant Science, 2016, 6:544. doi: 10.3389/fpls.2016.00544.

PMID: 27148348

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Quantitative phosphoproteomics reveals substrates and mechanisms for the fission yeast DYRK kinase Pom1.

Kettenbach A, Deng L, Wu Y, Baldissard S, Gerber S, and Moseley JB*

Molecular & Cellular Proteomics, 2015, 14, 1275-87.

PMID: 26834758

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Dueling kinases regulate cell size at division through the SAD kinase Cdr2.

Deng L, Baldissard S, Kettenbach AN, Gerber SA, and Moseley JB*

Current Biology, 2014, 24, 428-433.

PMID: 24508166.

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Megadalton node assembly by binding of Skb1 to the membrane anchor Slf1.

Deng L, Kabeche R, Wang N, Wu JQ, and Moseley JB*

Molecular Biology of the Cell, 2014, 25, 2660-2668.

PMID: 25009287

**A highlight from MBoC Selection; Highlighted in October 2014 ASCB Newsletter

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Wheat TaNPSN SNARE homologues are involved in vesicle-mediated resistance to stripe rust (Puccinia striiformis f. sp. tritici).

Wang X, Wang X, Deng L, Chang H, Dubcovsky J, Feng H, Han Q, Huang L, and Kang Z*

Journal of Experimental Botany, 2014, 65, 4807–4820.

PMID: 24963004

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Compartmentalized nodes control mitotic entry signaling in fission yeast.

Deng L, and Moseley JB*

Molecular Biology of the Cell, 2013, 24, 1872-1881.

PMID: 23615447

**A highlight from MBoC Selection; Highlighted in July 2013 ASCB Newsletter

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抗艾滋病药物的评价与预测模型.

邓麟, 顾立伟, 王锋钢, 王经民*

纯粹数学与应用数学, 2012, 28, 275-284.

 

Characterization of a pathogenesis-related thaumatin-like protein gene TaPR5 from wheat induced by stripe rust fungus.

Wang X, Tang C, Deng, L, Cai G, Liu X, Liu B, Han Q, Buchenauer H, Wei G, Han D, Huang L, and Kang Z*

Physiologia Plantarum, 2010, 139, 27-38.

PMID: 20059734

 

Characterization of a novel wheat NAC transcription factor gene involved in defense response against stripe rust pathogen infection and abiotic stresses.

Xia N, Zhang G, Liu X, Deng L, Cai G, Zhang Y, Wang X, Zhao J, Huang L, and Kang Z*

Molecular Biology Reports, 2010, 37, 3703-3712.

PMID: 20213512.

 

条锈菌诱导的小麦TaHin1的克隆与表达特征分析.

邓麟#,王晓杰#, 刘新颖, 蔡高磊, 汤春蕾, 魏国荣, 黄丽丽, 康振生*

中国农业科学, 2010, 43, 2403-2409.

​

条锈菌诱导的小麦TaOZR 的克隆及特征分析.

蔡高磊, 王晓杰, 刘丹, 邓麟, 刘新颖, 汤春蕾, 赵杰, 魏国荣, 黄丽丽, 康振生*

中国农业科学, 2010, 43, 2403-2409.

 

小麦钙调素新亚型TaCaM5 的克隆及表达分析.

刘新颖, 王晓杰, 薛杰, 夏宁, 邓麟, 蔡高磊, 汤春蕾, 魏国荣, 黄丽丽, 康振生*

​作物学报. 2010, 36, 953−960.

 

植物化感作用研究进展.

邓麟, 曹金锁, 王秦虎, 常伟平

陕西农业科学, 2007, 4, 81-83.

 

人工神经网络预测蛋白质二级结构的编码技术综述.

王秦虎, 邓麟, 韩翠芹

陕西农业科学 2007, 6, 109-112.